Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vmn1r223Q5SSA0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Vmn1r223Q5SSA0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vmn1r223Q5SSA0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Vmn1r223Q5SSA0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vmn1r223Q5SSA0 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vmn1r223Q5SSA0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Mir874-201ENSMUST00000104769 76 ntBASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Gm6912-201ENSMUST00000117218 544 ntBASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Gm12151-201ENSMUST00000121374 290 ntBASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Mir6977-201ENSMUST00000184960 64 ntBASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Gm7775-201ENSMUST00000218871 853 ntBASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vmn1r223Q5SSA0 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.6□□□□□ -0.55
Vmn1r223Q5SSA0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vmn1r223Q5SSA0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vmn1r223Q5SSA0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.6□□□□□ -0.55
Vmn1r223Q5SSA0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms