Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim80Q3V061 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim80Q3V061 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 Gm44855-201ENSMUST00000205725 362 ntBASIC13.72□□□□□ -0.21
Trim80Q3V061 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim80Q3V061 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trim80Q3V061 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim80Q3V061 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.72□□□□□ -0.21
Trim80Q3V061 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim80Q3V061 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim80Q3V061 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trim80Q3V061 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Trim80Q3V061 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Gm24694-201ENSMUST00000180054 110 ntBASIC13.71□□□□□ -0.21
Trim80Q3V061 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Gm27663-201ENSMUST00000184839 110 ntBASIC13.71□□□□□ -0.21
Trim80Q3V061 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.71□□□□□ -0.21
Trim80Q3V061 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim80Q3V061 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim80Q3V061 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim80Q3V061 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim80Q3V061 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trim80Q3V061 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim80Q3V061 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim80Q3V061 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trim80Q3V061 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim80Q3V061 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim80Q3V061 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim80Q3V061 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Gm5566-201ENSMUST00000116118 459 ntBASIC13.7□□□□□ -0.22
Trim80Q3V061 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Gm9794-201ENSMUST00000202370 423 ntBASIC13.7□□□□□ -0.22
Trim80Q3V061 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim80Q3V061 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Gm7653-201ENSMUST00000214567 508 ntBASIC13.7□□□□□ -0.22
Trim80Q3V061 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.7□□□□□ -0.22
Trim80Q3V061 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim80Q3V061 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim80Q3V061 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim80Q3V061 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim80Q3V061 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim80Q3V061 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim80Q3V061 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim80Q3V061 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim80Q3V061 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim80Q3V061 Gm24543-201ENSMUST00000103867 82 ntBASIC13.69□□□□□ -0.22
Trim80Q3V061 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.69□□□□□ -0.22
Trim80Q3V061 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim80Q3V061 Gm14127-201ENSMUST00000117906 678 ntBASIC13.69□□□□□ -0.22
Trim80Q3V061 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim80Q3V061 Gm9719-201ENSMUST00000162765 543 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms