Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Gm12669-201ENSMUST00000122162 1009 ntBASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 AC153881.2-201ENSMUST00000214877 204 ntBASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm6433-201ENSMUST00000118634 875 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm12644-201ENSMUST00000119935 606 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm12882-201ENSMUST00000121696 517 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm27742-201ENSMUST00000184667 60 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm3928-201ENSMUST00000121141 1307 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm37500-201ENSMUST00000192059 1443 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Cks1brtQ3UNC9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms