Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Gm12585-201ENSMUST00000117307 290 ntBASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.06□□□□□ -0.16
Trim43aQ3TL54 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Mir7684-201ENSMUST00000183858 60 ntBASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Gm7063-201ENSMUST00000186840 981 ntBASIC14.06□□□□□ -0.16
Trim43aQ3TL54 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Gm46209-201ENSMUST00000217912 553 ntBASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gm27533-201ENSMUST00000183800 152 ntBASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gm17837-201ENSMUST00000186435 985 ntBASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43aQ3TL54 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim43aQ3TL54 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms