Protein–RNA interactions for Protein: Q08EE8

1700061G19Rik, RIKEN cDNA 1700061G19 gene, mousemouse

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700061G19RikQ08EE8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
1700061G19RikQ08EE8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm5687-201ENSMUST00000118252 640 ntBASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm15429-201ENSMUST00000151268 798 ntBASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Itm2b-204ENSMUST00000228637 783 ntBASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
1700061G19RikQ08EE8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Gm45668-201ENSMUST00000211271 493 ntBASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
1700061G19RikQ08EE8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms