Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.69□□□□□ -0.38
Hoxc4Q08624 Olfr284-202ENSMUST00000206647 966 ntBASIC12.69□□□□□ -0.38
Hoxc4Q08624 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Gm45930-201ENSMUST00000221330 292 ntBASIC12.69□□□□□ -0.38
Hoxc4Q08624 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.68□□□□□ -0.38
Hoxc4Q08624 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.68□□□□□ -0.38
Hoxc4Q08624 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm38158-201ENSMUST00000194617 339 ntBASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm38266-201ENSMUST00000194931 421 ntBASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm3961-201ENSMUST00000204425 994 ntBASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gm18935-201ENSMUST00000212692 664 ntBASIC12.68□□□□□ -0.38
Hoxc4Q08624 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.68□□□□□ -0.38
Hoxc4Q08624 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.68□□□□□ -0.38
Hoxc4Q08624 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc4Q08624 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.67□□□□□ -0.38
Hoxc4Q08624 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Gm12291-201ENSMUST00000121627 311 ntBASIC12.67□□□□□ -0.38
Hoxc4Q08624 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.67□□□□□ -0.38
Hoxc4Q08624 Gm29396-201ENSMUST00000185659 716 ntBASIC12.67□□□□□ -0.38
Hoxc4Q08624 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.67□□□□□ -0.38
Hoxc4Q08624 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms