Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tff1Q08423 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.04□□□□□ -0.64
Tff1Q08423 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.04□□□□□ -0.64
Tff1Q08423 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tff1Q08423 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.04□□□□□ -0.64
Tff1Q08423 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.04□□□□□ -0.64
Tff1Q08423 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.04□□□□□ -0.64
Tff1Q08423 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.03□□□□□ -0.64
Tff1Q08423 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Gm4875-201ENSMUST00000118257 786 ntBASIC11.03□□□□□ -0.64
Tff1Q08423 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.03□□□□□ -0.64
Tff1Q08423 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.03□□□□□ -0.64
Tff1Q08423 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.03□□□□□ -0.64
Tff1Q08423 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tff1Q08423 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.03□□□□□ -0.64
Tff1Q08423 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.03□□□□□ -0.64
Tff1Q08423 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tff1Q08423 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tff1Q08423 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tff1Q08423 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tff1Q08423 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tff1Q08423 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tff1Q08423 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Tff1Q08423 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.02□□□□□ -0.65
Tff1Q08423 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Tff1Q08423 Gm13385-201ENSMUST00000121089 220 ntBASIC11.02□□□□□ -0.65
Tff1Q08423 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.02□□□□□ -0.65
Tff1Q08423 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tff1Q08423 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.02□□□□□ -0.65
Tff1Q08423 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.02□□□□□ -0.65
Tff1Q08423 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.02□□□□□ -0.65
Tff1Q08423 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.02□□□□□ -0.65
Tff1Q08423 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.02□□□□□ -0.65
Tff1Q08423 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.02□□□□□ -0.65
Tff1Q08423 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Tff1Q08423 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.02□□□□□ -0.65
Tff1Q08423 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Tff1Q08423 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tff1Q08423 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.02□□□□□ -0.65
Tff1Q08423 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tff1Q08423 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tff1Q08423 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
Tff1Q08423 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Tff1Q08423 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms