Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.03□□□□□ -0.32
Sox4Q06831 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox4Q06831 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox4Q06831 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox4Q06831 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox4Q06831 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.03□□□□□ -0.32
Sox4Q06831 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Gm10156-201ENSMUST00000122364 462 ntBASIC13.03□□□□□ -0.32
Sox4Q06831 Gm22331-201ENSMUST00000158066 136 ntBASIC13.03□□□□□ -0.32
Sox4Q06831 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Sox4Q06831 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox4Q06831 Gm6266-201ENSMUST00000203844 806 ntBASIC13.03□□□□□ -0.32
Sox4Q06831 Gm45841-201ENSMUST00000207700 164 ntBASIC13.03□□□□□ -0.32
Sox4Q06831 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Gm16372-201ENSMUST00000073088 450 ntBASIC13.03□□□□□ -0.32
Sox4Q06831 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.03□□□□□ -0.32
Sox4Q06831 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox4Q06831 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox4Q06831 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox4Q06831 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sox4Q06831 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox4Q06831 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox4Q06831 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox4Q06831 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox4Q06831 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sox4Q06831 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Gm16202-201ENSMUST00000117532 544 ntBASIC13.02□□□□□ -0.33
Sox4Q06831 Gm8213-201ENSMUST00000118191 441 ntBASIC13.02□□□□□ -0.33
Sox4Q06831 Gm15824-201ENSMUST00000119516 955 ntBASIC13.02□□□□□ -0.33
Sox4Q06831 Gm13829-201ENSMUST00000119600 138 ntBASIC13.02□□□□□ -0.33
Sox4Q06831 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.02□□□□□ -0.33
Sox4Q06831 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.02□□□□□ -0.33
Sox4Q06831 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.02□□□□□ -0.33
Sox4Q06831 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sox4Q06831 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.02□□□□□ -0.33
Sox4Q06831 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sox4Q06831 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox4Q06831 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sox4Q06831 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox4Q06831 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.02□□□□□ -0.33
Sox4Q06831 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sox4Q06831 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox4Q06831 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox4Q06831 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox4Q06831 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox4Q06831 Gm14127-201ENSMUST00000117906 678 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Gm12203-201ENSMUST00000118235 598 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Gm12209-201ENSMUST00000120089 596 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.01□□□□□ -0.33
Sox4Q06831 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox4Q06831 Gm24644-201ENSMUST00000157114 139 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms