Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.62□□□□□ -0.39
Cxcr5Q04683 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcr5Q04683 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Cxcr5Q04683 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcr5Q04683 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcr5Q04683 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcr5Q04683 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcr5Q04683 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.61□□□□□ -0.39
Cxcr5Q04683 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Gm9063-201ENSMUST00000223299 582 ntBASIC12.61□□□□□ -0.39
Cxcr5Q04683 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Gm5161-201ENSMUST00000075243 853 ntBASIC12.61□□□□□ -0.39
Cxcr5Q04683 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.61□□□□□ -0.39
Cxcr5Q04683 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcr5Q04683 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.6□□□□□ -0.39
Cxcr5Q04683 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.6□□□□□ -0.39
Cxcr5Q04683 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cxcr5Q04683 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.6□□□□□ -0.39
Cxcr5Q04683 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.6□□□□□ -0.39
Cxcr5Q04683 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.6□□□□□ -0.39
Cxcr5Q04683 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcr5Q04683 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.6□□□□□ -0.39
Cxcr5Q04683 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcr5Q04683 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms