Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.22□□□□□ -0.29
Col6a2Q02788 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a2Q02788 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a2Q02788 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a2Q02788 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Col6a2Q02788 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Col6a2Q02788 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.22□□□□□ -0.29
Col6a2Q02788 Gm44069-201ENSMUST00000204898 506 ntBASIC13.22□□□□□ -0.29
Col6a2Q02788 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.22□□□□□ -0.29
Col6a2Q02788 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.22□□□□□ -0.29
Col6a2Q02788 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Gm9899-201ENSMUST00000065519 555 ntBASIC13.22□□□□□ -0.29
Col6a2Q02788 Gm10146-201ENSMUST00000072739 309 ntBASIC13.22□□□□□ -0.29
Col6a2Q02788 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a2Q02788 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a2Q02788 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.21□□□□□ -0.29
Col6a2Q02788 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Col6a2Q02788 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
Col6a2Q02788 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Gm8805-201ENSMUST00000117848 313 ntBASIC13.21□□□□□ -0.29
Col6a2Q02788 Gm1335-201ENSMUST00000121653 386 ntBASIC13.21□□□□□ -0.29
Col6a2Q02788 Gm13123-201ENSMUST00000122173 492 ntBASIC13.21□□□□□ -0.29
Col6a2Q02788 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col6a2Q02788 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.21□□□□□ -0.29
Col6a2Q02788 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col6a2Q02788 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a2Q02788 Gm37497-201ENSMUST00000195830 798 ntBASIC13.21□□□□□ -0.29
Col6a2Q02788 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.21□□□□□ -0.29
Col6a2Q02788 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col6a2Q02788 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.21□□□□□ -0.29
Col6a2Q02788 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Gm25007-201ENSMUST00000083808 133 ntBASIC13.21□□□□□ -0.29
Col6a2Q02788 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.21□□□□□ -0.29
Col6a2Q02788 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a2Q02788 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.21□□□□□ -0.3
Col6a2Q02788 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a2Q02788 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a2Q02788 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a2Q02788 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a2Q02788 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.21□□□□□ -0.3
Col6a2Q02788 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a2Q02788 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a2Q02788 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.21□□□□□ -0.3
Col6a2Q02788 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.21□□□□□ -0.3
Col6a2Q02788 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a2Q02788 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.2□□□□□ -0.3
Col6a2Q02788 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Col6a2Q02788 Gm37424-201ENSMUST00000191727 561 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.2□□□□□ -0.3
Col6a2Q02788 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col6a2Q02788 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a2Q02788 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms