Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Xrn1P97789 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Xrn1P97789 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Xrn1P97789 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.39■□□□□ 0.53
Xrn1P97789 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Xrn1P97789 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Xrn1P97789 Gm44999-201ENSMUST00000207456 1493 ntBASIC18.39■□□□□ 0.53
Xrn1P97789 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Xrn1P97789 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Xrn1P97789 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC18.39■□□□□ 0.53
Xrn1P97789 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Xrn1P97789 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC18.38■□□□□ 0.53
Xrn1P97789 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Xrn1P97789 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Xrn1P97789 Gm14644-201ENSMUST00000116671 647 ntBASIC18.38■□□□□ 0.53
Xrn1P97789 Gm13611-201ENSMUST00000118269 318 ntBASIC18.38■□□□□ 0.53
Xrn1P97789 Selenot-ps-201ENSMUST00000119098 593 ntBASIC18.38■□□□□ 0.53
Xrn1P97789 Gm12196-201ENSMUST00000120954 262 ntBASIC18.38■□□□□ 0.53
Xrn1P97789 Gm13813-201ENSMUST00000120998 787 ntBASIC18.38■□□□□ 0.53
Xrn1P97789 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC18.38■□□□□ 0.53
Xrn1P97789 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Gm43916-201ENSMUST00000205062 967 ntBASIC18.38■□□□□ 0.53
Xrn1P97789 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC18.38■□□□□ 0.53
Xrn1P97789 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC18.38■□□□□ 0.53
Xrn1P97789 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Xrn1P97789 AC135469.1-201ENSMUST00000225984 772 ntBASIC18.38■□□□□ 0.53
Xrn1P97789 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Xrn1P97789 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Xrn1P97789 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC18.37■□□□□ 0.53
Xrn1P97789 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Gm7851-201ENSMUST00000117574 323 ntBASIC18.37■□□□□ 0.53
Xrn1P97789 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC18.37■□□□□ 0.53
Xrn1P97789 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC18.37■□□□□ 0.53
Xrn1P97789 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC18.37■□□□□ 0.53
Xrn1P97789 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC18.37■□□□□ 0.53
Xrn1P97789 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Xrn1P97789 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Gm21998-201ENSMUST00000117552 1308 ntBASIC18.37■□□□□ 0.53
Xrn1P97789 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Gm14150-201ENSMUST00000122404 1354 ntBASIC18.37■□□□□ 0.53
Xrn1P97789 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Xrn1P97789 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC18.37■□□□□ 0.53
Xrn1P97789 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC18.37■□□□□ 0.53
Xrn1P97789 AC138604.1-201ENSMUST00000226969 739 ntBASIC18.37■□□□□ 0.53
Xrn1P97789 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Xrn1P97789 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.36■□□□□ 0.53
Xrn1P97789 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Xrn1P97789 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Xrn1P97789 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Xrn1P97789 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Xrn1P97789 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Xrn1P97789 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Xrn1P97789 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Xrn1P97789 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Xrn1P97789 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Xrn1P97789 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Xrn1P97789 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Xrn1P97789 Gm11989-201ENSMUST00000117240 672 ntBASIC18.36■□□□□ 0.53
Xrn1P97789 Gm11362-201ENSMUST00000118838 850 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms