Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.66□□□□□ -0.22
Trim43bP86448 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim43bP86448 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim43bP86448 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.65□□□□□ -0.22
Trim43bP86448 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trim43bP86448 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim43bP86448 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trim43bP86448 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trim43bP86448 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim43bP86448 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim43bP86448 Gm21470-201ENSMUST00000187680 696 ntBASIC13.65□□□□□ -0.22
Trim43bP86448 Gm10766-202ENSMUST00000194123 606 ntBASIC13.65□□□□□ -0.22
Trim43bP86448 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim43bP86448 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim43bP86448 Gm19220-201ENSMUST00000222682 803 ntBASIC13.65□□□□□ -0.22
Trim43bP86448 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.65□□□□□ -0.22
Trim43bP86448 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim43bP86448 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim43bP86448 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim43bP86448 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.65□□□□□ -0.22
Trim43bP86448 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim43bP86448 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim43bP86448 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.65□□□□□ -0.22
Trim43bP86448 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43bP86448 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Trim43bP86448 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim43bP86448 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.64□□□□□ -0.23
Trim43bP86448 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim43bP86448 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Gm12859-201ENSMUST00000117834 427 ntBASIC13.64□□□□□ -0.23
Trim43bP86448 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Trim43bP86448 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim43bP86448 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim43bP86448 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim43bP86448 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim43bP86448 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim43bP86448 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43bP86448 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Trim43bP86448 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim43bP86448 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim43bP86448 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.63□□□□□ -0.23
Trim43bP86448 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim43bP86448 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.63□□□□□ -0.23
Trim43bP86448 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Trim43bP86448 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim43bP86448 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43bP86448 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim43bP86448 Gm37714-201ENSMUST00000194742 342 ntBASIC13.63□□□□□ -0.23
Trim43bP86448 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms