Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Gm12585-201ENSMUST00000117307 290 ntBASIC12.1□□□□□ -0.47
Cdh11P55288 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cdh11P55288 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh11P55288 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Gm28760-201ENSMUST00000185995 736 ntBASIC12.1□□□□□ -0.47
Cdh11P55288 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.1□□□□□ -0.47
Cdh11P55288 Gm7653-201ENSMUST00000214567 508 ntBASIC12.1□□□□□ -0.47
Cdh11P55288 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Gm9797-201ENSMUST00000052902 613 ntBASIC12.1□□□□□ -0.47
Cdh11P55288 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdh11P55288 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdh11P55288 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.1□□□□□ -0.47
Cdh11P55288 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.1□□□□□ -0.47
Cdh11P55288 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh11P55288 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh11P55288 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.09□□□□□ -0.47
Cdh11P55288 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 Gm22189-201ENSMUST00000103822 86 ntBASIC12.09□□□□□ -0.47
Cdh11P55288 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdh11P55288 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdh11P55288 Gm42612-201ENSMUST00000197986 623 ntBASIC12.09□□□□□ -0.47
Cdh11P55288 Gm43170-201ENSMUST00000199827 612 ntBASIC12.09□□□□□ -0.47
Cdh11P55288 Gm9794-201ENSMUST00000202370 423 ntBASIC12.09□□□□□ -0.47
Cdh11P55288 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdh11P55288 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.09□□□□□ -0.47
Cdh11P55288 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdh11P55288 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdh11P55288 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh11P55288 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdh11P55288 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh11P55288 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh11P55288 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh11P55288 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.08□□□□□ -0.48
Cdh11P55288 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdh11P55288 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cdh11P55288 Gm14928-201ENSMUST00000120198 477 ntBASIC12.08□□□□□ -0.48
Cdh11P55288 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdh11P55288 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdh11P55288 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdh11P55288 Gm28631-201ENSMUST00000190740 334 ntBASIC12.08□□□□□ -0.48
Cdh11P55288 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cdh11P55288 Gm8515-201ENSMUST00000194852 576 ntBASIC12.08□□□□□ -0.48
Cdh11P55288 Gm6745-201ENSMUST00000199216 526 ntBASIC12.08□□□□□ -0.48
Cdh11P55288 Gm18027-201ENSMUST00000218947 619 ntBASIC12.08□□□□□ -0.48
Cdh11P55288 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Cdh11P55288 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh11P55288 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdh11P55288 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms