Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-6P43688 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.54□□□□□ -0.4
Nkx2-6P43688 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-6P43688 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-6P43688 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.53□□□□□ -0.4
Nkx2-6P43688 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Gm11637-201ENSMUST00000120601 592 ntBASIC12.53□□□□□ -0.4
Nkx2-6P43688 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Gm3961-201ENSMUST00000204425 994 ntBASIC12.53□□□□□ -0.4
Nkx2-6P43688 Gm45880-201ENSMUST00000213041 853 ntBASIC12.53□□□□□ -0.4
Nkx2-6P43688 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.53□□□□□ -0.4
Nkx2-6P43688 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.53□□□□□ -0.4
Nkx2-6P43688 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-6P43688 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-6P43688 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-6P43688 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Gm13369-201ENSMUST00000119442 987 ntBASIC12.52□□□□□ -0.41
Nkx2-6P43688 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Gm16379-201ENSMUST00000161469 348 ntBASIC12.52□□□□□ -0.41
Nkx2-6P43688 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Gm7029-201ENSMUST00000173226 450 ntBASIC12.52□□□□□ -0.41
Nkx2-6P43688 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Gm8762-201ENSMUST00000193486 339 ntBASIC12.52□□□□□ -0.41
Nkx2-6P43688 Gm37008-201ENSMUST00000195712 319 ntBASIC12.52□□□□□ -0.41
Nkx2-6P43688 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-6P43688 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms