Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.14□□□□□ -0.47
Nkx2-2P42586 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.14□□□□□ -0.47
Nkx2-2P42586 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.14□□□□□ -0.47
Nkx2-2P42586 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Gm9794-201ENSMUST00000202370 423 ntBASIC12.14□□□□□ -0.47
Nkx2-2P42586 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Nkx2-2P42586 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.14□□□□□ -0.47
Nkx2-2P42586 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Gm16372-201ENSMUST00000073088 450 ntBASIC12.14□□□□□ -0.47
Nkx2-2P42586 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.14□□□□□ -0.47
Nkx2-2P42586 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-2P42586 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.13□□□□□ -0.47
Nkx2-2P42586 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.13□□□□□ -0.47
Nkx2-2P42586 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Gm16202-201ENSMUST00000117532 544 ntBASIC12.13□□□□□ -0.47
Nkx2-2P42586 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Gm38671-201ENSMUST00000200573 130 ntBASIC12.13□□□□□ -0.47
Nkx2-2P42586 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.13□□□□□ -0.47
Nkx2-2P42586 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx2-2P42586 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.13□□□□□ -0.47
Nkx2-2P42586 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-2P42586 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-2P42586 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms