Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox6P40645 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox6P40645 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox6P40645 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox6P40645 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox6P40645 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Sox6P40645 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox6P40645 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox6P40645 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox6P40645 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox6P40645 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
Sox6P40645 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox6P40645 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox6P40645 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Sox6P40645 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox6P40645 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox6P40645 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox6P40645 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox6P40645 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.46□□□□□ -0.42
Sox6P40645 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox6P40645 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.46□□□□□ -0.42
Sox6P40645 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.46□□□□□ -0.42
Sox6P40645 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox6P40645 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sox6P40645 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox6P40645 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox6P40645 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.45□□□□□ -0.42
Sox6P40645 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox6P40645 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Sox6P40645 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox6P40645 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.45□□□□□ -0.42
Sox6P40645 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Sox6P40645 Gm10766-202ENSMUST00000194123 606 ntBASIC12.45□□□□□ -0.42
Sox6P40645 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox6P40645 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox6P40645 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sox6P40645 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox6P40645 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox6P40645 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox6P40645 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox6P40645 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.44□□□□□ -0.42
Sox6P40645 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox6P40645 Gm15487-201ENSMUST00000122373 465 ntBASIC12.44□□□□□ -0.42
Sox6P40645 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox6P40645 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.44□□□□□ -0.42
Sox6P40645 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.44□□□□□ -0.42
Sox6P40645 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.44□□□□□ -0.42
Sox6P40645 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Gm20445-201ENSMUST00000061905 565 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms