Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cd9P40240 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Cd9P40240 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cd9P40240 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.06□□□□□ -0.32
Cd9P40240 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cd9P40240 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cd9P40240 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cd9P40240 Mir686-201ENSMUST00000102174 109 ntBASIC13.06□□□□□ -0.32
Cd9P40240 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cd9P40240 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.06□□□□□ -0.32
Cd9P40240 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cd9P40240 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.06□□□□□ -0.32
Cd9P40240 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.06□□□□□ -0.32
Cd9P40240 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.06□□□□□ -0.32
Cd9P40240 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Cd9P40240 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.06□□□□□ -0.32
Cd9P40240 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Gm6180-201ENSMUST00000065243 498 ntBASIC13.06□□□□□ -0.32
Cd9P40240 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cd9P40240 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cd9P40240 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cd9P40240 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.06□□□□□ -0.32
Cd9P40240 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Cd9P40240 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.06□□□□□ -0.32
Cd9P40240 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd9P40240 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cd9P40240 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.05□□□□□ -0.32
Cd9P40240 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.05□□□□□ -0.32
Cd9P40240 Gm8213-201ENSMUST00000118191 441 ntBASIC13.05□□□□□ -0.32
Cd9P40240 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.05□□□□□ -0.32
Cd9P40240 Gm10156-201ENSMUST00000122364 462 ntBASIC13.05□□□□□ -0.32
Cd9P40240 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.05□□□□□ -0.32
Cd9P40240 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.05□□□□□ -0.32
Cd9P40240 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.05□□□□□ -0.32
Cd9P40240 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.05□□□□□ -0.32
Cd9P40240 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.05□□□□□ -0.32
Cd9P40240 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.05□□□□□ -0.32
Cd9P40240 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cd9P40240 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cd9P40240 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd9P40240 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.05□□□□□ -0.32
Cd9P40240 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cd9P40240 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Cd9P40240 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cd9P40240 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.04□□□□□ -0.32
Cd9P40240 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms