Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm4879-201ENSMUST00000122190 1272 ntBASIC19.42■□□□□ 0.7
Chd1P40201 Gm15744-201ENSMUST00000161734 213 ntBASIC19.42■□□□□ 0.7
Chd1P40201 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC19.42■□□□□ 0.7
Chd1P40201 Gm43186-201ENSMUST00000198130 824 ntBASIC19.42■□□□□ 0.7
Chd1P40201 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chd1P40201 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Chd1P40201 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Gm37133-201ENSMUST00000192705 1922 ntBASIC19.42■□□□□ 0.7
Chd1P40201 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC19.42■□□□□ 0.7
Chd1P40201 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1P40201 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Chd1P40201 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1P40201 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1P40201 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1P40201 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1P40201 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Chd1P40201 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Chd1P40201 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1P40201 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chd1P40201 Gm24934-201ENSMUST00000103764 111 ntBASIC19.41■□□□□ 0.7
Chd1P40201 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chd1P40201 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1P40201 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chd1P40201 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1P40201 Gm2965-201ENSMUST00000198365 343 ntBASIC19.41■□□□□ 0.7
Chd1P40201 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC19.41■□□□□ 0.7
Chd1P40201 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1P40201 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chd1P40201 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Gm12857-201ENSMUST00000117678 592 ntBASIC19.4■□□□□ 0.7
Chd1P40201 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Chd1P40201 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Chd1P40201 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.4■□□□□ 0.7
Chd1P40201 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1P40201 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.39■□□□□ 0.7
Chd1P40201 Gm12579-201ENSMUST00000118040 783 ntBASIC19.39■□□□□ 0.7
Chd1P40201 Rprl1-201ENSMUST00000158050 327 ntBASIC19.39■□□□□ 0.7
Chd1P40201 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1P40201 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Chd1P40201 Gm43184-201ENSMUST00000197247 542 ntBASIC19.39■□□□□ 0.7
Chd1P40201 Gm7395-201ENSMUST00000216059 1045 ntBASIC19.39■□□□□ 0.7
Chd1P40201 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1P40201 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1P40201 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1P40201 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Chd1P40201 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1P40201 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1P40201 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1P40201 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Chd1P40201 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Chd1P40201 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1P40201 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1P40201 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1P40201 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1P40201 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC19.39■□□□□ 0.69
Chd1P40201 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1P40201 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Chd1P40201 Gm19091-201ENSMUST00000208120 978 ntBASIC19.39■□□□□ 0.69
Chd1P40201 AC151275.1-201ENSMUST00000224870 585 ntBASIC19.39■□□□□ 0.69
Chd1P40201 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC19.39■□□□□ 0.69
Chd1P40201 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1P40201 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1P40201 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.38■□□□□ 0.69
Chd1P40201 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Gm15703-201ENSMUST00000120250 880 ntBASIC19.38■□□□□ 0.69
Chd1P40201 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC19.38■□□□□ 0.69
Chd1P40201 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC19.38■□□□□ 0.69
Chd1P40201 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Chd1P40201 Ighv1-48-201ENSMUST00000191795 294 ntBASIC19.38■□□□□ 0.69
Chd1P40201 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 CT571245.2-201ENSMUST00000218421 305 ntBASIC19.38■□□□□ 0.69
Chd1P40201 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms