Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.22□□□□□ -0.29
LdlrP35951 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.22□□□□□ -0.29
LdlrP35951 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LdlrP35951 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.21□□□□□ -0.29
LdlrP35951 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LdlrP35951 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LdlrP35951 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.21□□□□□ -0.29
LdlrP35951 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.21□□□□□ -0.29
LdlrP35951 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.21□□□□□ -0.29
LdlrP35951 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.21□□□□□ -0.29
LdlrP35951 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.21□□□□□ -0.29
LdlrP35951 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.21□□□□□ -0.29
LdlrP35951 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LdlrP35951 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LdlrP35951 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LdlrP35951 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LdlrP35951 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LdlrP35951 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LdlrP35951 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LdlrP35951 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.21□□□□□ -0.3
LdlrP35951 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LdlrP35951 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LdlrP35951 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LdlrP35951 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LdlrP35951 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.2□□□□□ -0.3
LdlrP35951 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Mir874-201ENSMUST00000104769 76 ntBASIC13.2□□□□□ -0.3
LdlrP35951 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.2□□□□□ -0.3
LdlrP35951 Gm15770-201ENSMUST00000117498 584 ntBASIC13.2□□□□□ -0.3
LdlrP35951 Gm13829-201ENSMUST00000119600 138 ntBASIC13.2□□□□□ -0.3
LdlrP35951 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LdlrP35951 Gm24420-201ENSMUST00000176676 59 ntBASIC13.2□□□□□ -0.3
LdlrP35951 Gm4804-201ENSMUST00000182234 999 ntBASIC13.2□□□□□ -0.3
LdlrP35951 Gm8602-201ENSMUST00000184045 607 ntBASIC13.2□□□□□ -0.3
LdlrP35951 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.2□□□□□ -0.3
LdlrP35951 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.2□□□□□ -0.3
LdlrP35951 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LdlrP35951 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LdlrP35951 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LdlrP35951 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.2□□□□□ -0.3
LdlrP35951 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LdlrP35951 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LdlrP35951 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LdlrP35951 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LdlrP35951 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LdlrP35951 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LdlrP35951 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
LdlrP35951 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LdlrP35951 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LdlrP35951 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LdlrP35951 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LdlrP35951 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms