Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.61□□□□□ -0.23
Nfkb1P25799 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.61□□□□□ -0.23
Nfkb1P25799 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Mir686-201ENSMUST00000102174 109 ntBASIC13.61□□□□□ -0.23
Nfkb1P25799 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.61□□□□□ -0.23
Nfkb1P25799 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nfkb1P25799 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.61□□□□□ -0.23
Nfkb1P25799 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.61□□□□□ -0.23
Nfkb1P25799 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.61□□□□□ -0.23
Nfkb1P25799 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.61□□□□□ -0.23
Nfkb1P25799 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.61□□□□□ -0.23
Nfkb1P25799 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.61□□□□□ -0.23
Nfkb1P25799 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nfkb1P25799 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.61□□□□□ -0.23
Nfkb1P25799 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nfkb1P25799 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nfkb1P25799 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nfkb1P25799 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.6□□□□□ -0.23
Nfkb1P25799 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.6□□□□□ -0.23
Nfkb1P25799 Gm19184-201ENSMUST00000196798 928 ntBASIC13.6□□□□□ -0.23
Nfkb1P25799 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.6□□□□□ -0.23
Nfkb1P25799 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Gm9823-201ENSMUST00000051212 327 ntBASIC13.6□□□□□ -0.23
Nfkb1P25799 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Nfkb1P25799 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Nfkb1P25799 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nfkb1P25799 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nfkb1P25799 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nfkb1P25799 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.59□□□□□ -0.23
Nfkb1P25799 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nfkb1P25799 Gm22018-201ENSMUST00000104357 131 ntBASIC13.59□□□□□ -0.23
Nfkb1P25799 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Nfkb1P25799 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Nfkb1P25799 Gm26927-201ENSMUST00000182385 965 ntBASIC13.59□□□□□ -0.23
Nfkb1P25799 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Nfkb1P25799 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nfkb1P25799 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Nfkb1P25799 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms