Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
BdnfP21237 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.74□□□□□ -0.37
BdnfP21237 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
BdnfP21237 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
BdnfP21237 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.73□□□□□ -0.37
BdnfP21237 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
BdnfP21237 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
BdnfP21237 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.73□□□□□ -0.37
BdnfP21237 Gm13453-201ENSMUST00000118708 357 ntBASIC12.73□□□□□ -0.37
BdnfP21237 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
BdnfP21237 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.73□□□□□ -0.37
BdnfP21237 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.73□□□□□ -0.37
BdnfP21237 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.73□□□□□ -0.37
BdnfP21237 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
BdnfP21237 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
BdnfP21237 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
BdnfP21237 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.73□□□□□ -0.37
BdnfP21237 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
BdnfP21237 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
BdnfP21237 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BdnfP21237 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.72□□□□□ -0.37
BdnfP21237 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
BdnfP21237 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.72□□□□□ -0.37
BdnfP21237 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.72□□□□□ -0.37
BdnfP21237 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
BdnfP21237 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.72□□□□□ -0.37
BdnfP21237 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.72□□□□□ -0.37
BdnfP21237 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.72□□□□□ -0.37
BdnfP21237 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Gm7775-201ENSMUST00000218871 853 ntBASIC12.72□□□□□ -0.37
BdnfP21237 Gm9063-201ENSMUST00000223299 582 ntBASIC12.72□□□□□ -0.37
BdnfP21237 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.72□□□□□ -0.37
BdnfP21237 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
BdnfP21237 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms