Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC12.67□□□□□ -0.38
Msx1P13297 Gm38671-201ENSMUST00000200573 130 ntBASIC12.67□□□□□ -0.38
Msx1P13297 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.67□□□□□ -0.38
Msx1P13297 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Gm6013-201ENSMUST00000212264 699 ntBASIC12.67□□□□□ -0.38
Msx1P13297 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.67□□□□□ -0.38
Msx1P13297 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Msx1P13297 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Msx1P13297 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Msx1P13297 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.66□□□□□ -0.38
Msx1P13297 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx1P13297 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Msx1P13297 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.66□□□□□ -0.38
Msx1P13297 Gm15376-201ENSMUST00000122258 783 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Gm26464-201ENSMUST00000157094 305 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx1P13297 Gm27514-201ENSMUST00000183692 110 ntBASIC12.66□□□□□ -0.38
Msx1P13297 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.66□□□□□ -0.38
Msx1P13297 Gm44251-201ENSMUST00000204963 442 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Gm44683-201ENSMUST00000209088 484 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx1P13297 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.66□□□□□ -0.38
Msx1P13297 Gm6983-201ENSMUST00000214912 628 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx1P13297 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx1P13297 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Gm10012-201ENSMUST00000078252 192 ntBASIC12.66□□□□□ -0.38
Msx1P13297 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.66□□□□□ -0.38
Msx1P13297 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Msx1P13297 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx1P13297 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Msx1P13297 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Msx1P13297 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.65□□□□□ -0.38
Msx1P13297 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Msx1P13297 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Msx1P13297 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Msx1P13297 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.65□□□□□ -0.38
Msx1P13297 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.65□□□□□ -0.38
Msx1P13297 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Gm15371-201ENSMUST00000117057 784 ntBASIC12.65□□□□□ -0.38
Msx1P13297 Gm13612-201ENSMUST00000119276 390 ntBASIC12.65□□□□□ -0.38
Msx1P13297 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.65□□□□□ -0.38
Msx1P13297 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.65□□□□□ -0.38
Msx1P13297 Gm37017-201ENSMUST00000195266 747 ntBASIC12.65□□□□□ -0.38
Msx1P13297 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC12.65□□□□□ -0.38
Msx1P13297 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.65□□□□□ -0.38
Msx1P13297 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.65□□□□□ -0.38
Msx1P13297 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.65□□□□□ -0.38
Msx1P13297 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.65□□□□□ -0.38
Msx1P13297 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Msx1P13297 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.65□□□□□ -0.38
Msx1P13297 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx1P13297 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms