Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sod1P08228 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sod1P08228 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sod1P08228 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sod1P08228 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.36□□□□□ -0.43
Sod1P08228 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.36□□□□□ -0.43
Sod1P08228 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sod1P08228 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.36□□□□□ -0.43
Sod1P08228 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.36□□□□□ -0.43
Sod1P08228 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.36□□□□□ -0.43
Sod1P08228 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Gm23363-201ENSMUST00000175024 79 ntBASIC12.36□□□□□ -0.43
Sod1P08228 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sod1P08228 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.36□□□□□ -0.43
Sod1P08228 AA914427-201ENSMUST00000193194 1166 ntBASIC12.36□□□□□ -0.43
Sod1P08228 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.36□□□□□ -0.43
Sod1P08228 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.36□□□□□ -0.43
Sod1P08228 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.36□□□□□ -0.43
Sod1P08228 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.36□□□□□ -0.43
Sod1P08228 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.36□□□□□ -0.43
Sod1P08228 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Gm22058-201ENSMUST00000083393 310 ntBASIC12.36□□□□□ -0.43
Sod1P08228 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
Sod1P08228 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sod1P08228 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Sod1P08228 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.36□□□□□ -0.43
Sod1P08228 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sod1P08228 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.36□□□□□ -0.43
Sod1P08228 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sod1P08228 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Sod1P08228 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sod1P08228 Gm11930-201ENSMUST00000117788 190 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Gm14017-201ENSMUST00000121934 386 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Gm24990-201ENSMUST00000157406 323 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.35□□□□□ -0.43
Sod1P08228 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Gm8885-201ENSMUST00000189382 598 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Gm19931-201ENSMUST00000198920 368 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.35□□□□□ -0.43
Sod1P08228 Rps4l-202ENSMUST00000204242 789 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Gm44967-201ENSMUST00000207047 631 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.35□□□□□ -0.43
Sod1P08228 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.35□□□□□ -0.43
Sod1P08228 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.35□□□□□ -0.43
Sod1P08228 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.35□□□□□ -0.43
Sod1P08228 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sod1P08228 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sod1P08228 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.35□□□□□ -0.43
Sod1P08228 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sod1P08228 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms