Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P06344 Gm11425-201ENSMUST00000119608 498 ntBASIC11.82□□□□□ -0.52
P06344 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.82□□□□□ -0.52
P06344 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.82□□□□□ -0.52
P06344 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.82□□□□□ -0.52
P06344 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.82□□□□□ -0.52
P06344 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.82□□□□□ -0.52
P06344 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.82□□□□□ -0.52
P06344 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Gm9396-201ENSMUST00000076703 567 ntBASIC11.82□□□□□ -0.52
P06344 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
P06344 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.82□□□□□ -0.52
P06344 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.82□□□□□ -0.52
P06344 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.82□□□□□ -0.52
P06344 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
P06344 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.81□□□□□ -0.52
P06344 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.81□□□□□ -0.52
P06344 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.81□□□□□ -0.52
P06344 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
P06344 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.81□□□□□ -0.52
P06344 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.81□□□□□ -0.52
P06344 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.81□□□□□ -0.52
P06344 Gm8213-201ENSMUST00000118191 441 ntBASIC11.81□□□□□ -0.52
P06344 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Gm8810-201ENSMUST00000172895 754 ntBASIC11.81□□□□□ -0.52
P06344 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.81□□□□□ -0.52
P06344 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.81□□□□□ -0.52
P06344 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.81□□□□□ -0.52
P06344 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.81□□□□□ -0.52
P06344 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
P06344 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.81□□□□□ -0.52
P06344 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P06344 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P06344 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P06344 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
P06344 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
P06344 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P06344 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P06344 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.81□□□□□ -0.52
P06344 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06344 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.8□□□□□ -0.52
P06344 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.8□□□□□ -0.52
P06344 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
P06344 Gm10156-201ENSMUST00000122364 462 ntBASIC11.8□□□□□ -0.52
P06344 Gm24644-201ENSMUST00000157114 139 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms