Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CfdP03953 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.06□□□□□ -0.64
CfdP03953 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.06□□□□□ -0.64
CfdP03953 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CfdP03953 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CfdP03953 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.06□□□□□ -0.64
CfdP03953 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.06□□□□□ -0.64
CfdP03953 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.06□□□□□ -0.64
CfdP03953 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CfdP03953 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CfdP03953 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.06□□□□□ -0.64
CfdP03953 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CfdP03953 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.06□□□□□ -0.64
CfdP03953 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
CfdP03953 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CfdP03953 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CfdP03953 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
CfdP03953 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CfdP03953 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CfdP03953 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
CfdP03953 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CfdP03953 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.05□□□□□ -0.64
CfdP03953 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.05□□□□□ -0.64
CfdP03953 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.05□□□□□ -0.64
CfdP03953 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
CfdP03953 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CfdP03953 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.05□□□□□ -0.64
CfdP03953 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
CfdP03953 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CfdP03953 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CfdP03953 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CfdP03953 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CfdP03953 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms