Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.1□□□□□ -0.31
Pdlim1O70400 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.1□□□□□ -0.31
Pdlim1O70400 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.1□□□□□ -0.31
Pdlim1O70400 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.1□□□□□ -0.31
Pdlim1O70400 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.1□□□□□ -0.31
Pdlim1O70400 Proscos-202ENSMUST00000178990 666 ntBASIC13.1□□□□□ -0.31
Pdlim1O70400 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.1□□□□□ -0.31
Pdlim1O70400 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.1□□□□□ -0.31
Pdlim1O70400 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.1□□□□□ -0.31
Pdlim1O70400 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.1□□□□□ -0.31
Pdlim1O70400 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.1□□□□□ -0.31
Pdlim1O70400 Gm8598-201ENSMUST00000221184 836 ntBASIC13.1□□□□□ -0.31
Pdlim1O70400 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pdlim1O70400 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pdlim1O70400 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pdlim1O70400 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.09□□□□□ -0.31
Pdlim1O70400 Gm8652-201ENSMUST00000181363 964 ntBASIC13.09□□□□□ -0.31
Pdlim1O70400 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.09□□□□□ -0.31
Pdlim1O70400 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.09□□□□□ -0.31
Pdlim1O70400 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pdlim1O70400 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.09□□□□□ -0.31
Pdlim1O70400 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pdlim1O70400 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pdlim1O70400 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pdlim1O70400 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pdlim1O70400 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Pdlim1O70400 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pdlim1O70400 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pdlim1O70400 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Gm11978-201ENSMUST00000122315 466 ntBASIC13.08□□□□□ -0.32
Pdlim1O70400 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.08□□□□□ -0.32
Pdlim1O70400 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pdlim1O70400 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.08□□□□□ -0.32
Pdlim1O70400 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pdlim1O70400 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Pdlim1O70400 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pdlim1O70400 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.08□□□□□ -0.32
Pdlim1O70400 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.08□□□□□ -0.32
Pdlim1O70400 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms