Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gm12151-201ENSMUST00000121374 290 ntBASIC13.48□□□□□ -0.25
Banf1O54962 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.48□□□□□ -0.25
Banf1O54962 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.48□□□□□ -0.25
Banf1O54962 Gm43094-201ENSMUST00000196549 921 ntBASIC13.48□□□□□ -0.25
Banf1O54962 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Banf1O54962 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.48□□□□□ -0.25
Banf1O54962 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Banf1O54962 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.48□□□□□ -0.25
Banf1O54962 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Banf1O54962 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Banf1O54962 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Banf1O54962 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Banf1O54962 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.47□□□□□ -0.25
Banf1O54962 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Banf1O54962 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.47□□□□□ -0.25
Banf1O54962 Gm12485-201ENSMUST00000119641 291 ntBASIC13.47□□□□□ -0.25
Banf1O54962 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Mir7221-201ENSMUST00000184009 72 ntBASIC13.47□□□□□ -0.25
Banf1O54962 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.47□□□□□ -0.25
Banf1O54962 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.47□□□□□ -0.25
Banf1O54962 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.47□□□□□ -0.25
Banf1O54962 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Banf1O54962 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Banf1O54962 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Banf1O54962 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Banf1O54962 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Banf1O54962 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.46□□□□□ -0.25
Banf1O54962 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Banf1O54962 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Banf1O54962 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Banf1O54962 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Banf1O54962 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Banf1O54962 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.46□□□□□ -0.25
Banf1O54962 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.46□□□□□ -0.25
Banf1O54962 Gm21854-201ENSMUST00000179901 471 ntBASIC13.46□□□□□ -0.25
Banf1O54962 Gm27989-201ENSMUST00000184721 107 ntBASIC13.46□□□□□ -0.25
Banf1O54962 Gm29667-201ENSMUST00000190817 490 ntBASIC13.46□□□□□ -0.25
Banf1O54962 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.46□□□□□ -0.25
Banf1O54962 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.46□□□□□ -0.25
Banf1O54962 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Banf1O54962 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.46□□□□□ -0.25
Banf1O54962 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms