Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
FxnO35943 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
FxnO35943 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
FxnO35943 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.43□□□□□ -0.42
FxnO35943 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
FxnO35943 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.43□□□□□ -0.42
FxnO35943 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Gm21854-201ENSMUST00000179901 471 ntBASIC12.43□□□□□ -0.42
FxnO35943 Gm9522-201ENSMUST00000182394 926 ntBASIC12.43□□□□□ -0.42
FxnO35943 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Gm24447-201ENSMUST00000083977 338 ntBASIC12.43□□□□□ -0.42
FxnO35943 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
FxnO35943 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
FxnO35943 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
FxnO35943 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
FxnO35943 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FxnO35943 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.42□□□□□ -0.42
FxnO35943 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FxnO35943 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FxnO35943 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.42□□□□□ -0.42
FxnO35943 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.42□□□□□ -0.42
FxnO35943 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.42□□□□□ -0.42
FxnO35943 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.42□□□□□ -0.42
FxnO35943 Gm20445-201ENSMUST00000061905 565 ntBASIC12.42□□□□□ -0.42
FxnO35943 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.42□□□□□ -0.42
FxnO35943 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.42□□□□□ -0.42
FxnO35943 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.42□□□□□ -0.42
FxnO35943 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FxnO35943 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.42□□□□□ -0.42
FxnO35943 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.42□□□□□ -0.42
FxnO35943 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
FxnO35943 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
FxnO35943 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
FxnO35943 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.41□□□□□ -0.42
FxnO35943 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.41□□□□□ -0.42
FxnO35943 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.41□□□□□ -0.42
FxnO35943 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.41□□□□□ -0.42
FxnO35943 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.41□□□□□ -0.42
FxnO35943 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
FxnO35943 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
FxnO35943 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FxnO35943 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms