Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Gm6447-201ENSMUST00000118905 835 ntBASIC14.25□□□□□ -0.13
Nr1i3O35627 Gm15920-201ENSMUST00000118998 402 ntBASIC14.25□□□□□ -0.13
Nr1i3O35627 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Nr1i3O35627 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.25□□□□□ -0.13
Nr1i3O35627 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.25□□□□□ -0.13
Nr1i3O35627 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Nr1i3O35627 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.25□□□□□ -0.13
Nr1i3O35627 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Nr1i3O35627 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Nr1i3O35627 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.24□□□□□ -0.13
Nr1i3O35627 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nr1i3O35627 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.24□□□□□ -0.13
Nr1i3O35627 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.24□□□□□ -0.13
Nr1i3O35627 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.24□□□□□ -0.13
Nr1i3O35627 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Nr1i3O35627 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nr1i3O35627 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Nr1i3O35627 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1i3O35627 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Nr1i3O35627 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.23□□□□□ -0.13
Nr1i3O35627 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nr1i3O35627 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nr1i3O35627 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.23□□□□□ -0.13
Nr1i3O35627 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.23□□□□□ -0.13
Nr1i3O35627 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nr1i3O35627 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.23□□□□□ -0.13
Nr1i3O35627 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.23□□□□□ -0.13
Nr1i3O35627 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.23□□□□□ -0.13
Nr1i3O35627 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.23□□□□□ -0.13
Nr1i3O35627 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.23□□□□□ -0.13
Nr1i3O35627 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nr1i3O35627 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1i3O35627 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nr1i3O35627 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Gm15371-201ENSMUST00000117057 784 ntBASIC14.22□□□□□ -0.13
Nr1i3O35627 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.22□□□□□ -0.13
Nr1i3O35627 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.22□□□□□ -0.13
Nr1i3O35627 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms