Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.8□□□□□ -0.52
Sh2b3O09039 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh2b3O09039 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.8□□□□□ -0.52
Sh2b3O09039 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Mir6420-201ENSMUST00000185032 102 ntBASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm27731-201ENSMUST00000185192 107 ntBASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm44397-201ENSMUST00000195950 113 ntBASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sh2b3O09039 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.8□□□□□ -0.52
Sh2b3O09039 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.8□□□□□ -0.52
Sh2b3O09039 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2b3O09039 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.79□□□□□ -0.52
Sh2b3O09039 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.79□□□□□ -0.52
Sh2b3O09039 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.79□□□□□ -0.52
Sh2b3O09039 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.79□□□□□ -0.52
Sh2b3O09039 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.79□□□□□ -0.52
Sh2b3O09039 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Sh2b3O09039 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.79□□□□□ -0.52
Sh2b3O09039 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Sh2b3O09039 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sh2b3O09039 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.79□□□□□ -0.52
Sh2b3O09039 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2b3O09039 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.79□□□□□ -0.52
Sh2b3O09039 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2b3O09039 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2b3O09039 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2b3O09039 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms