Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Syt7-204ENSMUST00000223586 1344 ntBASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Gm29608-201ENSMUST00000190444 463 ntBASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh9F8VPK8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh9F8VPK8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh9F8VPK8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh9F8VPK8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh9F8VPK8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh9F8VPK8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh9F8VPK8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Gm15321-201ENSMUST00000121290 288 ntBASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh9F8VPK8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Gm9797-201ENSMUST00000052902 613 ntBASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms