Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Grk6-205ENSMUST00000224653 2976 ntBASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gm5187-201ENSMUST00000117317 991 ntBASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh17E9PXF0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Gm4271-201ENSMUST00000174444 973 ntBASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh17E9PXF0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh17E9PXF0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh17E9PXF0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh17E9PXF0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh17E9PXF0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms