Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.82□□□□□ -0.2
Scn1aA2APX8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Scn1aA2APX8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Gm45930-201ENSMUST00000221330 292 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Gm14704-201ENSMUST00000120300 874 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 Gm38158-201ENSMUST00000194617 339 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 Gm32025-201ENSMUST00000217960 307 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn1aA2APX8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.81□□□□□ -0.2
Scn1aA2APX8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1aA2APX8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Gm7809-201ENSMUST00000153199 742 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Gm19309-201ENSMUST00000218295 205 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Mir1247-201ENSMUST00000116706 82 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Gm11793-201ENSMUST00000120433 981 ntBASIC13.8□□□□□ -0.2
Scn1aA2APX8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms