Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm12403-201ENSMUST00000121384 959 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm24447-201ENSMUST00000083977 338 ntBASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav12d-1A0N8R0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm27680-201ENSMUST00000184192 160 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm27525-201ENSMUST00000184465 107 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm43703-201ENSMUST00000200523 763 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm5312-201ENSMUST00000203728 547 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav12d-1A0N8R0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms