Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Gm5279-201ENSMUST00000199575 745 ntBASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc112A0AUP1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Gm26464-201ENSMUST00000157094 305 ntBASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Gm19078-201ENSMUST00000206311 727 ntBASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc112A0AUP1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc112A0AUP1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms