Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rtn3Q9ES97 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rtn3Q9ES97 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rtn3Q9ES97 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rtn3Q9ES97 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rtn3Q9ES97 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rtn3Q9ES97 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Gm27772-201ENSMUST00000184900 187 ntBASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Gm18307-201ENSMUST00000206864 949 ntBASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rtn3Q9ES97 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rtn3Q9ES97 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.15□□□□□ -0.15
Rtn3Q9ES97 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.15□□□□□ -0.15
Rtn3Q9ES97 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Gm9002-201ENSMUST00000178437 499 ntBASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Gm27701-201ENSMUST00000184498 110 ntBASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.14□□□□□ -0.15
Rtn3Q9ES97 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rtn3Q9ES97 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Gm15806-201ENSMUST00000120696 955 ntBASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Gm43433-201ENSMUST00000196573 481 ntBASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn3Q9ES97 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms