Protein–RNA interactions for Protein: Q9D906

Atg7, Ubiquitin-like modifier-activating enzyme ATG7, mousemouse

Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg7Q9D906 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg7Q9D906 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg7Q9D906 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg7Q9D906 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg7Q9D906 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Atg7Q9D906 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg7Q9D906 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg7Q9D906 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Atg7Q9D906 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Atg7Q9D906 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.02□□□□□ -0.17
Atg7Q9D906 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.02□□□□□ -0.17
Atg7Q9D906 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Atg7Q9D906 Gm8805-201ENSMUST00000117848 313 ntBASIC14.02□□□□□ -0.17
Atg7Q9D906 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.02□□□□□ -0.17
Atg7Q9D906 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.02□□□□□ -0.17
Atg7Q9D906 Gm25261-201ENSMUST00000157416 134 ntBASIC14.02□□□□□ -0.17
Atg7Q9D906 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.02□□□□□ -0.17
Atg7Q9D906 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.02□□□□□ -0.17
Atg7Q9D906 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Atg7Q9D906 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.02□□□□□ -0.17
Atg7Q9D906 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atg7Q9D906 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.01□□□□□ -0.17
Atg7Q9D906 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Atg7Q9D906 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Atg7Q9D906 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atg7Q9D906 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg7Q9D906 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Tmed9-203ENSMUST00000224741 1450 ntBASIC14□□□□□ -0.17
Atg7Q9D906 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Atg7Q9D906 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Atg7Q9D906 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Atg7Q9D906 Gm12329-201ENSMUST00000120829 1007 ntBASIC14□□□□□ -0.17
Atg7Q9D906 Gm43118-201ENSMUST00000199149 775 ntBASIC14□□□□□ -0.17
Atg7Q9D906 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14□□□□□ -0.17
Atg7Q9D906 Gm4935-201ENSMUST00000221316 1198 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms