Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gm20554-201ENSMUST00000177421 2352 ntBASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chmp5Q9D7S9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp5Q9D7S9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Chmp5Q9D7S9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Chmp5Q9D7S9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.58■□□□□ 0.25
Chmp5Q9D7S9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp5Q9D7S9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Gm27321-201ENSMUST00000185021 205 ntBASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Gm38294-201ENSMUST00000192831 381 ntBASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp5Q9D7S9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm12403-201ENSMUST00000121384 959 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms