Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm44344-201ENSMUST00000200287 129 ntBASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Snf8Q9CZ28 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.67□□□□□ -0.22
Snf8Q9CZ28 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Gm27430-201ENSMUST00000184585 107 ntBASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Gm44333-201ENSMUST00000197168 107 ntBASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Gm5867-201ENSMUST00000063197 592 ntBASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Snf8Q9CZ28 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Snf8Q9CZ28 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Snf8Q9CZ28 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms