Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.18□□□□□ -0.3
Ssu72Q9CY97 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Gm18206-201ENSMUST00000207027 926 ntBASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ssu72Q9CY97 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Gm38144-201ENSMUST00000192790 465 ntBASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Gm5779-201ENSMUST00000218467 910 ntBASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Gm5161-201ENSMUST00000075243 853 ntBASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.16□□□□□ -0.3
Ssu72Q9CY97 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms