Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Gm37466-201ENSMUST00000195692 652 ntBASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim34aQ99PP6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Gm12502-201ENSMUST00000120197 444 ntBASIC16.28■□□□□ 0.2
Trim34aQ99PP6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Mir433-201ENSMUST00000093564 124 ntBASIC16.28■□□□□ 0.2
Trim34aQ99PP6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim34aQ99PP6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Mir3102-201ENSMUST00000175555 104 ntBASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.27■□□□□ 0.2
Trim34aQ99PP6 Gm32025-201ENSMUST00000217960 307 ntBASIC16.27■□□□□ 0.2
Trim34aQ99PP6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms