Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Gm24447-201ENSMUST00000083977 338 ntBASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.77□□□□□ -0.2
Cdk5rap3Q99LM2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cdk5rap3Q99LM2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cdk5rap3Q99LM2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdk5rap3Q99LM2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.77□□□□□ -0.2
Cdk5rap3Q99LM2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap3Q99LM2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdk5rap3Q99LM2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms