Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vmp1Q99KU0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Vmp1Q99KU0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.84□□□□□ -0.35
Vmp1Q99KU0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vmp1Q99KU0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vmp1Q99KU0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vmp1Q99KU0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vmp1Q99KU0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vmp1Q99KU0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vmp1Q99KU0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.35
Vmp1Q99KU0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vmp1Q99KU0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Vmp1Q99KU0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gm24420-201ENSMUST00000176676 59 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gm8927-201ENSMUST00000181978 981 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gm28631-201ENSMUST00000190740 334 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gm18905-201ENSMUST00000205454 928 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gm19220-201ENSMUST00000222682 803 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gm3222-201ENSMUST00000071282 990 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vmp1Q99KU0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vmp1Q99KU0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms