Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.12□□□□□ -0.47
Lims1Q99JW4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.12□□□□□ -0.47
Lims1Q99JW4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lims1Q99JW4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.11□□□□□ -0.47
Lims1Q99JW4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Gm38144-201ENSMUST00000192790 465 ntBASIC12.11□□□□□ -0.47
Lims1Q99JW4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.11□□□□□ -0.47
Lims1Q99JW4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.11□□□□□ -0.47
Lims1Q99JW4 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.11□□□□□ -0.47
Lims1Q99JW4 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.11□□□□□ -0.47
Lims1Q99JW4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lims1Q99JW4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.1□□□□□ -0.47
Lims1Q99JW4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms