Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Gm17794-201ENSMUST00000220252 955 ntBASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdha3Q91Y16 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdha3Q91Y16 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm12403-201ENSMUST00000121384 959 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm5356-201ENSMUST00000093326 615 ntBASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha3Q91Y16 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms