Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb6Q91XZ4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb6Q91XZ4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb6Q91XZ4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb6Q91XZ4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb6Q91XZ4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb6Q91XZ4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Pcdhb6Q91XZ4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.64□□□□□ -0.23
Pcdhb6Q91XZ4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb6Q91XZ4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Gm11978-201ENSMUST00000122315 466 ntBASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb6Q91XZ4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.61□□□□□ -0.23
Pcdhb6Q91XZ4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms