Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Gm11964-201ENSMUST00000120982 444 ntBASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Gm6082-201ENSMUST00000215204 454 ntBASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp7Q8R1T1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp7Q8R1T1 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.89■□□□□ 0.3
Chmp7Q8R1T1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Gm10434-201ENSMUST00000101158 471 ntBASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Gm18827-201ENSMUST00000188341 790 ntBASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Gm32025-201ENSMUST00000217960 307 ntBASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp7Q8R1T1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Gm11222-201ENSMUST00000119005 738 ntBASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Gm25668-201ENSMUST00000157700 129 ntBASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.88■□□□□ 0.29
Chmp7Q8R1T1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms