Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.85□□□□□ -0.51
ShfQ8CG80 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ShfQ8CG80 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Gm21854-201ENSMUST00000179901 471 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 Gm43575-201ENSMUST00000196420 516 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 Gm43094-201ENSMUST00000196549 921 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.84□□□□□ -0.51
ShfQ8CG80 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.84□□□□□ -0.51
ShfQ8CG80 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.84□□□□□ -0.51
ShfQ8CG80 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ShfQ8CG80 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.84□□□□□ -0.51
ShfQ8CG80 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ShfQ8CG80 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
ShfQ8CG80 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
ShfQ8CG80 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Gm11524-201ENSMUST00000119349 807 ntBASIC11.83□□□□□ -0.52
ShfQ8CG80 Gm13616-201ENSMUST00000120600 222 ntBASIC11.83□□□□□ -0.52
ShfQ8CG80 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Gm9522-201ENSMUST00000182394 926 ntBASIC11.83□□□□□ -0.52
ShfQ8CG80 Gm27306-201ENSMUST00000183970 107 ntBASIC11.83□□□□□ -0.52
ShfQ8CG80 Gm5279-201ENSMUST00000199575 745 ntBASIC11.83□□□□□ -0.52
ShfQ8CG80 Gm19078-201ENSMUST00000206311 727 ntBASIC11.83□□□□□ -0.52
ShfQ8CG80 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.83□□□□□ -0.52
ShfQ8CG80 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
ShfQ8CG80 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ShfQ8CG80 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms