Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc28aQ8CEI3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gm14822-201ENSMUST00000122247 291 ntBASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gm44344-201ENSMUST00000200287 129 ntBASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gm43703-201ENSMUST00000200523 763 ntBASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc28aQ8CEI3 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Chchd1-203ENSMUST00000224633 557 ntBASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc28aQ8CEI3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Gm25948-201ENSMUST00000175334 112 ntBASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc28aQ8CEI3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms