Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc28bQ8CEG5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Gm18889-201ENSMUST00000174284 929 ntBASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Gm21470-201ENSMUST00000187680 696 ntBASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Gm10175-201ENSMUST00000086013 645 ntBASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc28bQ8CEG5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Gm15460-201ENSMUST00000118147 391 ntBASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Gm13385-201ENSMUST00000121089 220 ntBASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc28bQ8CEG5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc28bQ8CEG5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc28bQ8CEG5 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.1□□□□□ -0.31
Ccdc28bQ8CEG5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc28bQ8CEG5 Daam2-202ENSMUST00000224595 1926 ntBASIC13.1□□□□□ -0.31
Ccdc28bQ8CEG5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc28bQ8CEG5 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc28bQ8CEG5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc28bQ8CEG5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc28bQ8CEG5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms